Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 1e-40
 Identities = 105/367 (28%), Positives = 186/367 (50%), Gaps = 8/367 (2%)

Query: 16  LLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75
           LL LL L     +D+ LP+ P +S  F V+      ++++F   + + Q+  GPL+D  G
Sbjct: 16  LLILLCLLGVFPLDVILPSFPALSDEFRVDTKQIAYSVSFFAVGVAMAQIVIGPLSDGIG 75

Query: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLF-GPQRS 134
           R+ + L G+S+  + AL    +   E  +  RL+Q LG C + V   A V+DL+ G QR+
Sbjct: 76  RKRLLLAGLSVSIVGALGCVFSTHYETFMAFRLVQALG-CGSLVLGQALVQDLYSGTQRN 134

Query: 135 GKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYM 194
              I   + +  FI +L+P+ G++L Q FGW A+F+     A +V L   + L ++    
Sbjct: 135 AMRILLTSASGLFI-SLSPLAGAFLQQSFGWEASFTVFVIIAAIVSLLSCVLLHDTPASH 193

Query: 195 GSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFW 254
              P+   +S Y  +L+   +L H+ L  LA A   +++  AP++LM RL+L+  +F+  
Sbjct: 194 DRAPS---MSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPLLLMGRLELTAYQFSLV 250

Query: 255 FGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQA--SALAFMLPV 312
           F    +  I+  M A  +  ++  +  +  G+  +  AG  +L+    A  S L  +LP+
Sbjct: 251 FIGYGLAYIVGGMAAAYLNSRVSPQTQIKAGLLLISTAGITLLMWEWVAGLSVLGALLPM 310

Query: 313 FLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEPQLLIG 372
            + + G   +  AA  +ALA +  +AG AA+L      +G+GL    +  +  E    +G
Sbjct: 311 IVCTTGTTLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLTSSVVAGLESELPAGLG 370

Query: 373 LTMWLAA 379
           +   +A+
Sbjct: 371 VLFMVAS 377