Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Bcr/CflA family multidrug resistance transporter from Pseudomonas putida KT2440

 Score =  172 bits (437), Expect = 1e-47
 Identities = 111/366 (30%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 12  QQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLA 71
           + +++L  L  F PLAID YLPA P ++QAF  +    Q T+  +   + +GQL  GP+A
Sbjct: 4   RMVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHVQATLAAYFLGLSIGQLAYGPVA 63

Query: 72  DKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGP 131
           D++GRR   + G++++ L++L    A +++ +++AR +Q LG CA  V + A V D   P
Sbjct: 64  DRFGRRKPLMFGVTLFTLASLACAYAPNLDTLVVARFIQALGGCAGMVLSRAIVSDKCDP 123

Query: 132 QRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESN 191
             S K+ S L   +   P LAP+LG  L    GW++ F  ++ F+    LA++L L ES 
Sbjct: 124 VASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPESL 183

Query: 192 P-YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNE 250
           P ++  +P    L +Y  +L    FL HA    +A+A + AY+  +P + ++   +    
Sbjct: 184 PEHIPRQPLSGALRQYLRLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEH 243

Query: 251 FTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLML--VLRNQASALAF 308
           + + FG NA   I+      +++ K G  + L   +   ++AG ++L       A     
Sbjct: 244 YGWLFGTNAAGFILVAQVNARLLAKRGPAFLLGRAVWLYLVAGLVLLGVAALRPAQLWPL 303

Query: 309 MLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMS---GSGLLVGTLQRIMP 365
           ++P+F+       I+  A+  A++  G +AG+A+AL+G  Q S   G+  LVG L     
Sbjct: 304 LVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCVQFSVAAGAAALVGLLHDGSA 363

Query: 366 EPQLLI 371
            P  ++
Sbjct: 364 VPMAIV 369