Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., MFS family multidrug transport protein, bicyclomycin resistance protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  146 bits (369), Expect = 9e-40
 Identities = 104/361 (28%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 16  LLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75
           +L LL +  PL+ID+YLPALP IS  F V    AQ T++ ++    +GQL  GP+AD  G
Sbjct: 14  ILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGFALGQLIYGPMADSLG 73

Query: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSG 135
           R+ V LGG  ++A +A+    AQ+I+ +++ R   GL A A SV   A +RD++  +   
Sbjct: 74  RKPVILGGTLVFAAAAVACALAQTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKEEFS 133

Query: 136 KMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMG 195
           +M+S++       P +API+G W+     W   F  +   A+L  + +   ++E+ P   
Sbjct: 134 RMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILAIAAILASVMIFALIKETLPVER 193

Query: 196 SRPAVFK--LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTF 253
            +P   +  +  +AA+ +    L +      + A + +++++ P + +E   +   +F +
Sbjct: 194 RQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVPPQDFGY 253

Query: 254 WFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFMLPVF 313
           +F +N V           VM  + +R+   +G   +  AG     L  Q +   +M+   
Sbjct: 254 YFALNIVFLF--------VMTIINSRFVRRVGALNMFRAG-----LWIQFAMAVWMVFSA 300

Query: 314 LSSIGF-AWILGAAA-------------GKALAPFGDKAGTAAALLGLFQMSGSGLLVGT 359
           L  IGF A ++G AA                L  F   AGTA++L G F+  G G +VG 
Sbjct: 301 LMGIGFWALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRF-GIGAIVGA 359

Query: 360 L 360
           L
Sbjct: 360 L 360