Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  130 bits (328), Expect = 5e-35
 Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 22/400 (5%)

Query: 8   QVSKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFA 67
           Q  K  +V L  L +   LA D+YLPA   I        A    +++ FL    V QL  
Sbjct: 2   QPGKGFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPAAAVSASLSLFLAGFAVAQLLW 61

Query: 68  GPLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRD 127
           GPL+D+YGR+ + L G+SI+AL +L     +S   +L  R +Q +G CA +V   A V D
Sbjct: 62  GPLSDRYGRKPILLLGLSIFALGSLGMLWVESAAALLTLRFVQAVGVCAATVIWQALVTD 121

Query: 128 LFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRL 187
            +  Q+  ++ + +   +   PALAP+LGSW+   F W+A F+ +    LL+ L  ALRL
Sbjct: 122 YYPSQKINRIFATIMPLVGLSPALAPLLGSWILTHFSWQAIFATLFVITLLLMLP-ALRL 180

Query: 188 QESNPYMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLS 247
           + S     +R        +A +L++ T+  +  +     A   A++T +P IL      +
Sbjct: 181 KPSGK---ARTEGQDKLTFATLLRSKTYRGNVLIYAACSASFFAWLTGSPFILS-----A 232

Query: 248 MNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWS------LIIGITTLMIAGSLMLVLRN 301
           M       G++ V   IA +           +W        ++G+  L +  +    L N
Sbjct: 233 MGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGYQLLPWLLGLYALSVIATWGAGLLN 292

Query: 302 QASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQ 361
            AS +  ++P  + +I    I      +AL PF    G AAAL    Q+ G   L   + 
Sbjct: 293 NASLVEILIPFCVMAIANGAIYPIVVAQALRPFPQATGRAAALQNTLQL-GLCFLASLVV 351

Query: 362 RIMPEPQLLIGLTMWLAAPALLILFSPLGFRW--HASVSE 399
             +    LL   ++ L+     ++ + LG++   HA  +E
Sbjct: 352 SWLISTPLLTTTSVMLST----VVLAALGYKMQSHADCAE 387