Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., bicyclomycin/multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score =  142 bits (359), Expect = 1e-38
 Identities = 91/348 (26%), Positives = 170/348 (48%), Gaps = 4/348 (1%)

Query: 16  LLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75
           +L LL +  PL+ID+YLPALP IS  F V     Q T++ ++    +GQL  GP+AD +G
Sbjct: 14  ILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGPMADSFG 73

Query: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSG 135
           R+ V LGG  ++A +A+    A +I+ +++ R   GL A A SV   A +RD++  +   
Sbjct: 74  RKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKEEFS 133

Query: 136 KMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMG 195
           +M+S++       P +API+G W+     W   F  +   A+L    +   ++E+ P   
Sbjct: 134 RMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFLIKETLPPER 193

Query: 196 SRPAVFK--LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTF 253
            +P   +  +  +AA+ +    L +      + A + +++++ P + +E   ++   F +
Sbjct: 194 RQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVAPENFGY 253

Query: 254 WFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFMLPVF 313
           +F +N V   +  +   + + ++G       G+    I  + M++          ++   
Sbjct: 254 YFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISALLGLGFWSLVVGV 313

Query: 314 LSSIG-FAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTL 360
            + +G  + +   A    L  F   AGTA++L G F+  G G +VG L
Sbjct: 314 AAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRF-GIGAIVGAL 360