Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  174 bits (441), Expect = 4e-48
 Identities = 114/347 (32%), Positives = 178/347 (51%), Gaps = 22/347 (6%)

Query: 20  LVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYGRRTV 79
           LVL  P  ID+YL  LP I++      A      + +L  M    +FAG +ADK GR+ V
Sbjct: 11  LVLLYPSGIDMYLVGLPHIARDLGASEAQLHIAFSAYLAGMASSMVFAGKIADKAGRQPV 70

Query: 80  ALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSGKMIS 139
           A+ G  I+AL++LL   AQS    L  R +QG+GA    V AFA +RD    QR  K++S
Sbjct: 71  AITGAIIFALASLLCSQAQSSTVFLAGRFIQGIGAGGCYVVAFAILRDTLSAQRRAKVLS 130

Query: 140 YLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGSR-- 197
            LNG  C IP LAP++G  +  +F W++ F  M     LV +     L+E++P  GS+  
Sbjct: 131 MLNGITCIIPVLAPVVGYLIMLKFPWQSLFWTMAAMGALVFILSISVLKETHP--GSQNT 188

Query: 198 -------PAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNE 250
                  PA   L+R+        FL   ++  L++AVIL YV  +PV+LME +     E
Sbjct: 189 GHTATIHPAEKLLNRF--------FLSRLAVTTLSVAVILTYVNVSPVLLMETMGFDRGE 240

Query: 251 FTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFML 310
           ++    + A++++    + P  ++    R  ++      + A +++    + A  LA   
Sbjct: 241 YSTVMALTAMVSMAVSFSTPFALNVFSQRALMLTSQVLFLTASAILATASSHAVMLA--- 297

Query: 311 PVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLV 357
            + L   GF+   G A  +AL PF  +AG A+++LG+ Q+ GS L +
Sbjct: 298 GITLICAGFSVGFGVAMSQALGPFSLRAGVASSVLGIAQVCGSSLWI 344