Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., drug resistance transporter, Bcr/CflA subfamily from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  140 bits (354), Expect = 5e-38
 Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 10/361 (2%)

Query: 9   VSKQQ----MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQ 64
           +SK+Q    +++L  L   SP +ID+YLP  P I++      A  Q ++T +L  + +GQ
Sbjct: 1   MSKKQYFVVILILGALSTISPFSIDMYLPGFPSIAKNLGTSIANVQLSLTSYLVGIAIGQ 60

Query: 65  LFAGPLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFAT 124
           LF GPL D++GR+     G+ IY L+++    + S+E +++ R +Q +G CA  VAA A 
Sbjct: 61  LFYGPLLDRFGRKKPLYIGLLIYVLASMACAWSNSVENLILMRFVQAIGGCAGMVAAQAM 120

Query: 125 VRDLFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMA 184
           VRD+F   ++ + ++ L   I   P +AP +G ++T  + W   F  + G  L++ +A  
Sbjct: 121 VRDIFPVNKTAQAMALLMLVIAVSPMIAPTVGGFVTAHYDWHTVFMILAGITLVILMASY 180

Query: 185 LRLQES---NPYMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILM 241
             L +    +  +  +P    + +Y  V K   FL +  +  +A A   AY++ +  + M
Sbjct: 181 FFLPDGAKPDHEVSLKPKQV-VKKYVEVTKNRQFLVYMLIGGVAGAAPFAYISGSADVFM 239

Query: 242 ERLQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLML--VL 299
               ++  ++ + F + A   I +      ++ K  +   + + +T   I G  M+  V 
Sbjct: 240 NIYGVTEQQYGWIFALLAFSMIGSTQLNHILLKKFTSEQIIKVALTYQTIIGFAMILGVW 299

Query: 300 RNQASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGT 359
               +    +  +F+   G       AA   LAPF   AG+AAA++G  +M+  G++ G 
Sbjct: 300 NGWLNVYTLIGMMFIFLTGHGLCNPNAAALTLAPFSRNAGSAAAMMGSMRMAMGGVVSGA 359

Query: 360 L 360
           +
Sbjct: 360 V 360