Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., MFS permease from Agrobacterium fabrum C58

 Score =  152 bits (385), Expect = 1e-41
 Identities = 110/387 (28%), Positives = 189/387 (48%), Gaps = 8/387 (2%)

Query: 10  SKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGP 69
           +K+  +L  LL   +P+++ IY PA+P++++ F    +  + +++ +     + QL AGP
Sbjct: 3   TKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLAGP 62

Query: 70  LADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLF 129
            +D +GRR  +L  +S++    LLA  A +IE +L+ARL+QG+GA      A A VRD F
Sbjct: 63  ASDAFGRRRASLVFLSVFLGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRDQF 122

Query: 130 GPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQE 189
               +  +++ +   +   PAL P +G      FGW++ F  M G       ++ + L+E
Sbjct: 123 TGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKSVFFLMAGLGAAAIFSVVIFLRE 182

Query: 190 SNPYMGS--RPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLS 247
           +     S  RP    LS Y  +L  P FL  A +   ++  + A  T    IL+  + ++
Sbjct: 183 TTVPDKSLIRPRRL-LSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGMT 241

Query: 248 MNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLML--VLRNQASA 305
              F     +         +    +  +LG R S+++G+      G L+L  V     S 
Sbjct: 242 PTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPSF 301

Query: 306 LAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMP 365
            + M PV ++++G A +  +    ALAPF   AG+A+A++G  QM GSG   GT   ++ 
Sbjct: 302 FSIMGPVAVATVGIALLTPSMVTAALAPFPHIAGSASAMMGFIQM-GSGFAGGTAASLIG 360

Query: 366 EPQLLIGLTMWLAAPALLILFSPLGFR 392
            P  L G  + +       + S +GFR
Sbjct: 361 SP--LTGFGIVIPVMEFTAVASYIGFR 385