Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bicyclomycin resistance protein from Acinetobacter radioresistens SK82

 Score =  146 bits (368), Expect = 1e-39
 Identities = 112/388 (28%), Positives = 190/388 (48%), Gaps = 21/388 (5%)

Query: 7   SQVSKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLF 66
           S  S   ++LL  L    PL+ID+YLPALP +++ F V   +  +T+  +   + VGQL 
Sbjct: 10  SHYSLPWLMLLASLTALGPLSIDMYLPALPGMAEEFGVSTQMVANTLPAYFLGLAVGQLI 69

Query: 67  AGPLADKYGRRTVALGGISIYALSALLAWSAQSIEW-MLMARLLQGLGACATSVAAFATV 125
            GP++D+ GR+     G+ +Y +++LL   A S EW ++ +R+LQ LG C   V A A +
Sbjct: 70  YGPVSDRIGRKKPLYFGLLLYVVASLLCAFATS-EWSLIFSRILQALGGCVGVVIARAAI 128

Query: 126 RDLFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMAL 185
           RD    Q S +  + +   +   P +AP LG+WL   F W A F  +    ++  + +AL
Sbjct: 129 RDRLDVQASAQAFASMMIVMGIAPVMAPALGAWLLIYFEWHAIFVALALIGIICCICVAL 188

Query: 186 RLQES-NPYMGSRPAVFK-LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMER 243
             +E+  P    + +  + LS Y  + +  +F     +     AV+  Y++SA  +L+++
Sbjct: 189 FFKETLQPERRLKLSARQVLSLYKTIFQDKSFRGPMVIGCFTGAVLFCYISSAASVLIDQ 248

Query: 244 LQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLV---LR 300
             LS   F + FG NAV   +      ++   +     L +G   L + G  +L+   L 
Sbjct: 249 YHLSQQHFAYAFGFNAVGITLFSSINKRLARNMSIIQRLKLG-GILQLMGVFILLGAGLY 307

Query: 301 NQASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTL 360
           +  +    M  +FL+  G  +    A   A+A  G +AGTA+A++G  Q +  GL+ G  
Sbjct: 308 DDTALAIVMSGLFLAVSGIGFTGPNAMALAMAEQGSRAGTASAIMGSMQFA-CGLVGG-- 364

Query: 361 QRIMPEPQLLIGLTMW--LAAPALLILF 386
                   L++    W  L   AL++LF
Sbjct: 365 --------LILNFLFWSPLLNMALVMLF 384