Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 8e-39
 Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 10/310 (3%)

Query: 11  LEKLMQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLF 70
           ++ +  +  L RIDLNLLV L  L+ E  VTRAA RL LSQ AVS +LA+LR+   DPL 
Sbjct: 1   MQSMQLMNDLRRIDLNLLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLL 60

Query: 71  VRTSYGLNATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPY 130
           VR    L  T +AL L P L   + Q++ L  P  F P S++ RF++A  +    + +P 
Sbjct: 61  VRQGGSLVPTARALELAPPLTEALGQVQALLAPNRFDPASAKRRFRVAMSDYSAAIFLPD 120

Query: 131 FLPTIFRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQE 190
            + T+ R  P + +       Q  +  + G +D G+   D+D+       + PA++    
Sbjct: 121 LVRTLRREAPGIDL-------QIIQASREGMVD-GVLNGDLDLAAGVFPDM-PAELRTTP 171

Query: 191 IYRDNQRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAIT 250
           ++ ++  C+V R         +L +YL+  HV +   G+    ++  L  +   R +AI+
Sbjct: 172 LFEEHYTCLVDRDSLPASGTLDLPTYLSRPHVLLEMRGSGTPEIERALTTIRERRHVAIS 231

Query: 251 VPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDP 310
           +P +  A  L   TD I T  S     +  Q  L+ +P P   P  A+ L WH  R  D 
Sbjct: 232 LPHWGVAPQLIQGTDLILTVSSRGLLNIDHQ-HLLAVPAPFHIPSFAFELAWHARRGGDS 290

Query: 311 ALRWLRELIQ 320
            L+WL   +Q
Sbjct: 291 GLQWLIGQVQ 300