Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 1e-30
 Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 15/303 (4%)

Query: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79
           ++++DL  L     + +  +V++AA RL ++Q+A S +L KLR  FDD LF RT+ G+  
Sbjct: 1   MSKLDLEWLAVFDEVYKTGNVSKAAERLGMAQAAASTALNKLRAHFDDRLFTRTAQGMQP 60

Query: 80  TPKALFLKPKL-DVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRH 138
           TP A  + P L + L    +     + F P  ++ RF+I   +    +++P  L  +   
Sbjct: 61  TPHAERIYPNLREALAQLAQAQGNRSSFDPAQAQRRFRICMTDISEVVLLPGLLDHLRHA 120

Query: 139 GPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPAD--ICEQEIYRDNQ 196
            P + I T   +  + R+LQ GE+D              +  +P  D    +Q ++  N 
Sbjct: 121 APGVHIETEIISTLSGRRLQDGEVDLA------------VGFMPQLDAGFYQQTLFMQNF 168

Query: 197 RCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNS 256
            C+  + HP +        +    H  V   G    ++D  LA LG +R++ + +  F S
Sbjct: 169 VCLAAQNHPRIGARLTRKRFEAEAHAVVSTSGTGHAIVDTTLARLGLKRNVVVRLSSFLS 228

Query: 257 AASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLR 316
            A +  +T+ +   P      +A Q  +  L  P   P  A    WH     DP   WLR
Sbjct: 229 VARIVAHTELLVVVPRILGRVLATQEPVKLLEPPFALPDYAVKQHWHERFHADPGNAWLR 288

Query: 317 ELI 319
             +
Sbjct: 289 RTL 291