Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  127 bits (320), Expect = 3e-34
 Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 14/310 (4%)

Query: 22  RIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATP 81
           +IDL+L+  L  ++ + SV+RAA RL + Q AVS +L +LRE   DPL VR+  G+  T 
Sbjct: 9   KIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVPTD 68

Query: 82  KAL-FLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHGP 140
             L  ++P   +L     L +    F PQS+   F+IAA + + PL +P  +  + R  P
Sbjct: 69  AGLRMIEPAASILRAAEMLFSDARGFDPQSAATTFRIAASDYMDPLFLPMLVAQVKRDAP 128

Query: 141 HLSISTHAWTEQT--FRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRC 198
              I  HA +  +     L +G++D  +             L PP D+    ++ D    
Sbjct: 129 LCQIEIHALSPDSDYHGHLALGQVDLVIGN----------WLKPPEDLHMARLFGDEVVS 178

Query: 199 VVRRGHPVLQYDWNLSSYLNLRHV-QVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSA 257
           +V + HP ++  W+L ++L   H+         R ++D  L +LG +R+I      F   
Sbjct: 179 LVNKDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFGLI 238

Query: 258 ASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRE 317
             +   +  + T    +    A ++ L  L  P+  P + Y   WH    +  + RWLRE
Sbjct: 239 PDMVASSLLVLTTGRQYCERFAARLPLAILECPVALPRLMYYQLWHERTHSSSSARWLRE 298

Query: 318 LIQTNTLHLR 327
            I+     LR
Sbjct: 299 CIKDVAASLR 308