Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 7e-29
 Identities = 86/297 (28%), Positives = 130/297 (43%), Gaps = 16/297 (5%)

Query: 27  LLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATPKA-LF 85
           LL    VL +  SVTRAA +L  SQ  +S  LA+LREQ +DPLFVRT  G+  TP+A   
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 86  LKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHGPHLSIS 145
           + P  +VL +   L      F   +++ RF++   ++ +  ++P  L  +  H P + + 
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131

Query: 146 THAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLP--PADICEQEIYRDNQRCVVRRG 203
                  T   L+ GE D              +  +P     + +Q ++  +  C+    
Sbjct: 132 AARIDGNTESALESGEADLA------------IGFVPWLGGGMYQQVLFEQDWVCLSNPQ 179

Query: 204 HPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAASLCTY 263
           HP L    +L  Y    HVQ+   G  + LL+  LA  G ER I + +P F     +   
Sbjct: 180 HPRLGDGMSLERYRAEGHVQISF-GTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGT 238

Query: 264 TDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRELIQ 320
           TD + T P H    +A    L     P E         WH     D   RWLRE+++
Sbjct: 239 TDLLGTLPRHIGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVVR 295