Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  175 bits (443), Expect = 2e-48
 Identities = 102/312 (32%), Positives = 171/312 (54%), Gaps = 11/312 (3%)

Query: 18  EKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGL 77
           + +  +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR  FDDPLFV +  GL
Sbjct: 3   KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62

Query: 78  NATPKALFLKPKLDVLVNQLE-LLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIF 136
           + TP  + ++  L   +     LL +P H +P+    +F++AA   +  +++      I+
Sbjct: 63  SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120

Query: 137 RHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQ 196
           +  P  +I    W   +   +  GE+D G +G++      +L    P  I  + ++ D  
Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180

Query: 197 RCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNS 256
              +R+ HP L   WNL ++L   H+ +  + +D W LD  L +LG ER IA+++P+F  
Sbjct: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240

Query: 257 AASLCTYTD--FIFTAPSHFTHW-VAKQMDLVELPLPMEFP-----PMAYTLFWHREREN 308
           +  +    D   + TAP +  ++    Q+ LV LPLP +        + +TL WH+   +
Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300

Query: 309 DPALRWLRELIQ 320
           +P + WLRE I+
Sbjct: 301 NPKIVWLRETIK 312