Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  129 bits (325), Expect = 8e-35
 Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 13/297 (4%)

Query: 23  IDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATPK 82
           IDLNLLV    L  E +VTRA +R+  +Q A+S +L++LR    D LFVR   GL  TP+
Sbjct: 13  IDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGLQPTPR 72

Query: 83  ALFLKPKLDVLVNQLELLTQ-PAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHGPH 141
           A+ L   + + + +++   Q    F P  S   F IA       +I+P  L  +    P 
Sbjct: 73  AVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLEEKAPG 132

Query: 142 LSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCVVR 201
           + I    ++    R   V  LD G  G D+ +    +   P + I    ++++   C++R
Sbjct: 133 IDIKVRDYSS---RDDAVSLLDSG--GVDLTVG---IPPTPTSRILSARLFQERFVCILR 184

Query: 202 RGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAASLC 261
           + HP+L   ++  ++L+L H+ V  D     + D  LA   + R  A+T+P  + A +L 
Sbjct: 185 KDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALV 244

Query: 262 TYTDFIFTA-PSHFTH-WVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLR 316
             +D + T   S   H   A+++ + + PLP+   P+ + L WHR  +  PA +WLR
Sbjct: 245 ASSDMVATVIESVVAHSGFAERLAVFDFPLPLN--PVPFVLSWHRRNDGHPAQQWLR 299