Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., HTH-type transcriptional regulator SyrM 1 from Acinetobacter radioresistens SK82

 Score =  131 bits (329), Expect = 3e-35
 Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 26/314 (8%)

Query: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79
           L R+DLNLL+ L VL+ E +VTRAA +L ++Q A+S  L +LR  F+DPL +R+S G+  
Sbjct: 3   LERVDLNLLIYLDVLLREKNVTRAAEQLGVTQPAMSNILRRLRNLFNDPLLIRSSEGMTP 62

Query: 80  TPKALFLKPKLDVLVNQLELLTQP-AHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRH 138
           T +AL L+P++   +  L ++ +P   F P +S   F+I   +     ++P  +  +   
Sbjct: 63  TERALELQPRIRDALADLSMILEPRTEFRPYTSNRVFRIMTSDYAEATLVPRLVKALRSE 122

Query: 139 GPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRC 198
            P++ +     ++ ++R ++ G++D  +       N+       P    +  ++RD+  C
Sbjct: 123 APNVVLDFLTPSDVSYRDMEQGKVDLAIN----RFNEI------PQSFHQVLVWRDSYSC 172

Query: 199 VVRRGHPVLQYDWNLSSYLNLRHVQVRCDGND-------------RWLLDYRLADLGYER 245
           ++   HP +  + NL SYL+ +H+ V   G                W +D  L  +G +R
Sbjct: 173 LLNNKHPAMN-NLNLKSYLDAQHIWVSKTGMGVGFGVNPEKQAGLGW-IDQALERIGQKR 230

Query: 246 DIAITVPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRE 305
            I++    +   A L    D I T P+      AK  +L+    P   P     + W   
Sbjct: 231 KISVFTRHYQMPALLAANVDLIATLPTRIARLQAKSQNLIIKDPPFYIPEFELKMAWCPL 290

Query: 306 RENDPALRWLRELI 319
             + PA RWLR+LI
Sbjct: 291 LHHHPAHRWLRQLI 304