Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., phosphomethylpyrimidine synthase ThiC from Rhodanobacter sp000427505 FW510-R12

 Score =  763 bits (1970), Expect = 0.0
 Identities = 391/620 (63%), Positives = 461/620 (74%), Gaps = 42/620 (6%)

Query: 22  PYPNSQKSYLLGS-RPDIRVPVREITLSDTLVGGSKDAPIFEPNEP-ICVYDTSGVYTDP 79
           P   S+K YL  S  P +RVP R++ L+D             P +P + +YDTSG YT+ 
Sbjct: 19  PIRGSRKVYLTPSGHPALRVPFRQVALTD-------------PRQPTLNLYDTSGPYTED 65

Query: 80  SHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADETLDELRYGHLPRIRRAMG 139
           +  IDL +GLP++RE W+  R    I P    H      AD  +        P  +R   
Sbjct: 66  AAAIDLARGLPRVREAWLAARGFEAIGPESGGH------AD--VGTPACPARPLRQRGRA 117

Query: 140 QHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQHAGQNFGAHLPDLITPEFV 199
              VTQL +AR GI+T EM + A REN  R    D +  ++  G++FGA +PD ++ EFV
Sbjct: 118 GQAVTQLEFARAGIVTEEMVYAAFRENLGRARALDDAAARRADGEDFGAAIPDFVSAEFV 177

Query: 200 RREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLVWATRWG 259
           R EIA GRAI+P NINHPE EPM+IGRNFLVK+NANIGNS+VSS + EEVEKLVW+ RWG
Sbjct: 178 REEIARGRAILPANINHPELEPMVIGRNFLVKINANIGNSAVSSGVAEEVEKLVWSIRWG 237

Query: 260 ADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRDTLLEQA 319
           ADTVMDLSTGRNIH  R WI+RN+PVPIGTVP+YQALEKV G    L WEV RDTL+EQA
Sbjct: 238 ADTVMDLSTGRNIHAIRSWIMRNAPVPIGTVPIYQALEKVGGDPLKLNWEVFRDTLIEQA 297

Query: 320 EQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSHHQENFLYTHFREICEIC 379
           EQGVDY TIHAG+ L YVP+TA RVTGIVSRGGSI+A+WCL+ H+E+FLY HF EIC IC
Sbjct: 298 EQGVDYVTIHAGVRLAYVPLTANRVTGIVSRGGSIMARWCLAGHRESFLYEHFAEICAIC 357

Query: 380 AQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEYDVQVMIEGPGHVPMHLI 439
             YDV+LSLGDGLRPGSIADAND AQFAEL TLGELT+IAW +  QVMIEGPGHVPMH I
Sbjct: 358 RAYDVSLSLGDGLRPGSIADANDAAQFAELETLGELTRIAWVHGCQVMIEGPGHVPMHKI 417

Query: 440 KANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLG 499
           KANMD+QL  C EAPFYTLGPL+TD+APGYDHITS IGAAMIGWFG AMLCYVTPKEHLG
Sbjct: 418 KANMDKQLALCGEAPFYTLGPLSTDVAPGYDHITSSIGAAMIGWFGTAMLCYVTPKEHLG 477

Query: 500 LPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLALDPVTAR 559
           LP+++DVKTG+I Y++AAHAADLAKGHP A++ D+ALS+ARFEFRWEDQFNLALDP TAR
Sbjct: 478 LPDRDDVKTGVIAYRIAAHAADLAKGHPAAKLHDDALSRARFEFRWEDQFNLALDPDTAR 537

Query: 560 AFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQTLDTTVIDLVMPAESIQLA 619
           AFHD TLP+E+ KVAHFCSMCGPKFCSMKISQ++R+                  ++ +LA
Sbjct: 538 AFHDATLPKEAHKVAHFCSMCGPKFCSMKISQDLRE------------------DAAKLA 579

Query: 620 -MQDKSREFLASGAELYHPL 638
            M  KS EF+A G  LY P+
Sbjct: 580 GMAAKSEEFMAVGGALYVPV 599