Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., phosphomethylpyrimidine synthase ThiC from Escherichia coli ECRC62

 Score =  979 bits (2532), Expect = 0.0
 Identities = 481/632 (76%), Positives = 531/632 (84%), Gaps = 14/632 (2%)

Query: 4   RKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPIFEP 63
           R++ R  A+ FIDTL    +PNS++ Y+ G+ P +RVP+REI LS TL+GGSK+ P +E 
Sbjct: 8   RREQRARAQHFIDTLEGTAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSKEQPQYEE 67

Query: 64  NEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADETL 123
           NE I VYDTSG Y DP   I++ +GL KLR+ WI+ R DT  L   SS + + RLAD+ L
Sbjct: 68  NEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKARLADDGL 127

Query: 124 DELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQHAG 183
           DELR+  +   +RA    RVTQLHYARQGIITPEMEF+AIREN  R   +   L  QH G
Sbjct: 128 DELRFSGVLTPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEVLRHQHPG 187

Query: 184 QNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSS 243
            +FGAHLP+ IT EFVR E+A GRAIIP NINHPESEPMIIGRNFLVKVNANIGNS+V+S
Sbjct: 188 MSFGAHLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTS 247

Query: 244 SIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVA 303
           SIEEEVEKLVW+TRWGADTVMDLSTGR IHETREWILRNSPVPIGTVP+YQALEKVNG+A
Sbjct: 248 SIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIA 307

Query: 304 ENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSHH 363
           E+LTWE  RDTLLEQAEQGVDYFTIHAG+LLRYVPMTAKR+TGIVSRGGSI+AKWCLSHH
Sbjct: 308 EDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHH 367

Query: 364 QENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEYD 423
           QENFLY HFREICEICA YDV+LSLGDGLRPGSI DANDEAQFAEL TLGELT+IAWEYD
Sbjct: 368 QENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYD 427

Query: 424 VQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW 483
           VQVMIEGPGHVPM +I+ NM E+L+HCHEAPFYTLGPLTTDIAPGYDH TSGIGAAMIGW
Sbjct: 428 VQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGW 487

Query: 484 FGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEF 543
           FGCAMLCYVTPKEHLGLPNKEDVK GLITYK+AAHAADLAKGHPGAQIRDNA+SKARFEF
Sbjct: 488 FGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEF 547

Query: 544 RWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQTLD 603
           RWEDQFNLALDP TARA+HDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYA  QT  
Sbjct: 548 RWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQT-- 605

Query: 604 TTVIDLVMPAESIQLAMQDKSREFLASGAELY 635
                       I++ M D S  F A G E+Y
Sbjct: 606 ------------IEMGMADMSENFRARGGEIY 625