Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., Shikimate dehydrogenase (NADP(+)) from Xanthobacter sp. DMC5

 Score =  121 bits (303), Expect = 2e-32
 Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 13/268 (4%)

Query: 10  VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFK 69
           V G P+ +S+SP +H  + +       Y  + VP +   +  +   A+G  GCNVT+P K
Sbjct: 7   VTGQPVTYSRSPLLHGYWLKAYGIDGAYEREEVPPEMAADFYRSLAARGYAGCNVTLPNK 66

Query: 70  EEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA--TIL 127
           E A+   D   E A   GA NTL  LD G++ G +TDG G + +L A      GA    L
Sbjct: 67  EIAFSVLDEADESAAALGAANTL-WLDGGKLHGASTDGYGFIANLDASAPGWDGARNCAL 125

Query: 128 LIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQ---S 184
           ++GAGGA+R V+  L+ +    + + NRT  +AE +A L      V+  AF+++ +    
Sbjct: 126 VVGAGGASRAVVHALVGRGFDRVVLANRTLERAETVASLFGP--RVRPLAFDRIAEVMGE 183

Query: 185 YDVIINSTSASLDGELP-AIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLG 243
            D+++N TS  + G  P  +D       +V  D++Y    T   + A   G  + +DGLG
Sbjct: 184 ADILVNCTSLGMKGSDPLTLDLTRLRQDAVVSDIVYVPLMTPLLKAASAAG-FRTVDGLG 242

Query: 244 MLVGQAAESFMLWRGLRPGTKQILRELR 271
           ML+ Q    F  W G+ P   ++ RELR
Sbjct: 243 MLLHQGVPGFRRWFGVTP---EVTRELR 267