Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., Shikimate dehydrogenase (NADP(+)) from Xanthobacter sp. DMC5

 Score = 94.0 bits (232), Expect = 3e-24
 Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 8/246 (3%)

Query: 8   YAVFGNPINHSKSP-FIHTLFARQTQQSMI--YTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           Y +  +PI+H K+P  ++ L AR+ +  ++  +      +    +  K   + GG    V
Sbjct: 20  YGILADPIHHVKTPQMLNALMAREGRDGVMVPFHVSSEELPRLVDGLKAMKSLGG--FVV 77

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA 124
           TVP K       D +++ AR  GA N +++  DG ++GD  DG+G V  L A  +  KG 
Sbjct: 78  TVPHKTAIVDLLDEVSDSARRIGACNVVRREADGRLIGDMLDGKGFVGGLKAAGIDPKGK 137

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQL-AELVAAYGEVKAQAFEQLKQ 183
            + L GAGGAA  +    ++   A +T+ NRT AKAE L A L  A+     +       
Sbjct: 138 GVYLAGAGGAANAIAFAFVEAGVARLTIANRTRAKAEDLAARLADAFPGAPVEIGTADPS 197

Query: 184 SYDVIINSTSASLD-GELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGL 242
            +D++ N+TS  L  G+   +D    +S  +  +++     T     A+  GC +   G 
Sbjct: 198 GHDIVANATSLGLKAGDALPLDASRLTSDQIVAEVIMQPEETAILAAAKAKGC-RTHPGK 256

Query: 243 GMLVGQ 248
            MLV Q
Sbjct: 257 PMLVCQ 262