Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 9/213 (4%)

Query: 61  GCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVL 120
           G N+T P K+      D L++ AR  GAVNT+    DG+ +G NTD  G  +        
Sbjct: 65  GLNITYPCKQAILPLLDELSDEARGIGAVNTV-VFKDGKRIGHNTDCLGFAEGFRRNLKD 123

Query: 121 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE-LVAAYGEVKAQAFE 179
           +    ++ +GAGGA   V   LL +    +++ +   ++A  L + L   +G  +AQ   
Sbjct: 124 VARQRVVQMGAGGAGAAVAHALLAEGVQQLSIFDVDISRARDLVDNLAQRFGTGRAQVGS 183

Query: 180 QLKQSY---DVIINSTSASLDGELPA--IDPVIFSSRSVCYDMMYGKGYTVFNQWARQHG 234
           QL+ +    D ++N+T   +  +LP   +   +  +     +++Y    T   + AR  G
Sbjct: 184 QLENAMAEADGLVNTTPMGM-AKLPGTPVPATLLRTELWVAEIVYFPLETELLRDARALG 242

Query: 235 CAQAIDGLGMLVGQAAESFMLWRGLRPGTKQIL 267
           C + +DG  M V QA ++F L+ G  P  +++L
Sbjct: 243 C-RTLDGGNMAVFQAVKAFELFSGEVPDAQRML 274