Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

 Score =  300 bits (769), Expect = 2e-86
 Identities = 156/272 (57%), Positives = 195/272 (71%), Gaps = 3/272 (1%)

Query: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           +D+Y VFGNPI HSKSP IH +FA QT + + Y+    P++ F+  A+ FF QG RG NV
Sbjct: 1   MDRYVVFGNPIGHSKSPLIHRMFAEQTGEQLDYSTLLAPLEDFSGCAREFFQQG-RGANV 59

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVL-LKG 123
           TVPFKE+AYR A+ LTERA+ AGAVNTL KL DG +LGDNTDG GLV+DL     L L+G
Sbjct: 60  TVPFKEDAYRLANSLTERAQRAGAVNTLSKLADGSLLGDNTDGAGLVRDLTVNAGLNLQG 119

Query: 124 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQ 183
             ILL+GAGGA RG L+PLL +QPAS+ + NRT  KAE LAEL    G V A  F+ L++
Sbjct: 120 KRILLLGAGGAVRGALEPLLAEQPASLIIANRTVEKAEMLAELFDDLGPVSASGFDWLRE 179

Query: 184 SYDVIINSTSASLDGELPAI-DPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGL 242
             DVIIN+TSASL G++P I   +I   ++ CYDMMY K  T F +WA +HG + A+DGL
Sbjct: 180 PVDVIINATSASLSGDVPPIASSLIEPGKTFCYDMMYAKEPTAFCRWATEHGASVAMDGL 239

Query: 243 GMLVGQAAESFMLWRGLRPGTKQILRELRKNL 274
           GMLV QAAE+F LWRG+RP +  +L ELR+ L
Sbjct: 240 GMLVEQAAEAFYLWRGVRPDSAPVLAELRRQL 271