Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 14/215 (6%)

Query: 56  AQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLL 115
           A G RGC V++PFKE A    D L +  +   ++NT+    DG +   NTD    ++ LL
Sbjct: 57  ALGVRGCGVSMPFKEAAIALVDELDDSVQAIDSLNTIVN-TDGHLKAYNTDYIA-IEQLL 114

Query: 116 AQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKA 175
            +  + K +T  L G+GG A+ V   L D   A+  +  R  A    LA+ +       A
Sbjct: 115 KKHAVPKDSTFALRGSGGMAKAVASALRDGGYANGVIVARNEAAGRALAQNLG-----YA 169

Query: 176 QAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSRSV-----CYDMMYGKGYTVFNQWA 230
              E       ++IN T   + G   A D + F + +V      +D++     T      
Sbjct: 170 WRAELADMRPQMLINVTPIGMTGGAEA-DALAFDADAVDVAETVFDVVAIPSETPLIVRG 228

Query: 231 RQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQ 265
           R  G  + I GL ++  QA E F+L+ G+RP  +Q
Sbjct: 229 RAQG-KRVITGLEVIAIQALEQFVLYTGVRPTDEQ 262