Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 13/235 (5%)

Query: 9   AVFGNPINHSKSPFIHT-LFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVP 67
           A  G P    K+P I+   F +Q   +++      P D      + F     RG  VT+P
Sbjct: 10  AHLGFPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAASLPQIFKFSNLRGALVTMP 69

Query: 68  FKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATIL 127
            K       D +T  AR+AGA N + K  DG +LGD  DG G V+ +  +  L KG  +L
Sbjct: 70  HKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGVERKGRLFKGTRVL 129

Query: 128 LIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQL-AELVAAYGEVKAQAFEQLKQSYD 186
           + G GG    +   +     A + + + + A A  L A L   Y ++K     +    YD
Sbjct: 130 VSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALAARLREHYPQMKVATGSKDPAGYD 189

Query: 187 VIINSTSAS------LDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGC 235
           V++N+T         L  ++  IDP  F       +++    YT   + A+  GC
Sbjct: 190 VVVNATPLGMKEGDPLPFDVDRIDPGTFVG-----EVVMKTEYTPLLEAAKAKGC 239