Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 4/231 (1%)

Query: 8   YAVFGNPINHSKSPF-IHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTV 66
           + V GNP+   K+P   + LF R    +++   +  P            +    G  VTV
Sbjct: 24  FPVVGNPVAQVKAPLAFNALFRRAGIDALVVPLELQPASVLDTCRGLLDSGSIGGLLVTV 83

Query: 67  PFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATI 126
           P+K+  +    +  E ARL GAVN +++  +G I GD  DG G V  L A      G  +
Sbjct: 84  PYKKTLFELVAQPGEPARLVGAVNAIRRSAEGAIAGDLFDGIGFVAGLRAAGHEPAGRKV 143

Query: 127 LLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQL-AELVAAYGEVKAQAFEQLKQ-S 184
           LL+GAGGA   V   LL    A + + +   A+AE L A L + +      +   L +  
Sbjct: 144 LLVGAGGAGSAVAAALLSAGVAWLGLFDVHTAQAEALAAHLQSRFSGSTVVSLRTLSEVD 203

Query: 185 YDVIINSTSASL-DGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHG 234
            D+ +N+T   +  G+   +DP    + ++  D++     T   + A Q G
Sbjct: 204 CDIAVNATPLGMKPGDPLPLDPAALPAGTLVVDVIMQPAETPLLRHAAQRG 254