Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) from Sphingobium sp. HT1-2

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 13/221 (5%)

Query: 60  RGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQV 119
           RGC +++PFKE      D L   AR   +VNT+   DDG + G NTD   + Q  L ++ 
Sbjct: 49  RGCAISMPFKEAVIPLIDDLESSARAIDSVNTIVN-DDGRLTGYNTDYVAVRQ--LLEKR 105

Query: 120 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE 179
           + K    LL G+GG A+ V   L D   A+ T+  R     + +A+      +    +  
Sbjct: 106 IEKPVPFLLRGSGGMAKAVAAALRDAGFANGTIIARNEMAGQAIADQYGFCWQADLPS-- 163

Query: 180 QLKQSYDVIINSTSASLDG---ELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCA 236
               S  ++IN T   ++G   +  A      ++ S  +D++     T F + AR     
Sbjct: 164 ---DSAPLLINVTPLGMEGKDRDALAFRAEQIAACSTAFDVVAQPVDTPFVRAARA-ARK 219

Query: 237 QAIDGLGMLVGQAAESFMLWRGLRPGTKQILRELRKNLEGA 277
             I G  ++V QA E F+L+ G+ PG   I RE  +   GA
Sbjct: 220 SVISGGEVIVLQAVEQFILYTGVSPGADDI-REAARYAHGA 259