Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 78/279 (27%), Positives = 119/279 (42%), Gaps = 12/279 (4%)

Query: 10  VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVP-----VDGFTEAAKHFFAQGGRGCNV 64
           + G  I  S+SP +H   A+    +++Y            D          A G  G NV
Sbjct: 20  LIGQGIAGSRSPHMHETEAKALGLTLVYRILDADRMGYRADDLPRLLPMLGAMGFDGINV 79

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA 124
           T PFK+      D L++ AR  GAVNT+    +G+  GDNTD  G     LA        
Sbjct: 80  THPFKQAVIPLLDSLSDAARALGAVNTI-LFRNGQAHGDNTDWSGYRAHFLAGLADRPRG 138

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELV-----AAYGEVKAQAFE 179
            I +IGAGGAA  V    LD     + + +    +A  LA+ +     AA  +  A A +
Sbjct: 139 RIAMIGAGGAAAAVGYAHLDLGATHLAIVDPAQERAAALADRLGALFPAARVQAMAHAAD 198

Query: 180 QLKQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAI 239
            +  +  V+  S    L       DP + +      D++Y   +T     A+  GCA  +
Sbjct: 199 AIADADGVVQTSPIGMLSHPGLPFDPDLLTPDQWVSDIIYFPLHTPLLVAAQAKGCA-IL 257

Query: 240 DGLGMLVGQAAESFMLWRGLRPGTKQILRELRKNLEGAL 278
            G GM V QAA +F L+  + P   ++L +  +  + A+
Sbjct: 258 TGGGMAVMQAAHAFALFTSVAPDCDRMLADFARATDAAV 296