Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., putative shikimate 5-dehydrogenase from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 9e-16
 Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 14/240 (5%)

Query: 32  QQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNT 91
           Q  + +  + +  D    A     A G RGC V++P+KE      D +   A    +VNT
Sbjct: 33  QLGLDFYYKAMRTDDLPAAVAGIRALGIRGCGVSMPYKEACMALVDEIDPSAAAIESVNT 92

Query: 92  LKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASIT 151
           L    +G +   NTD    V+ LLAQ  +  G    L G+GG A+ V   L D   A   
Sbjct: 93  LVNC-NGHLKAYNTDYLA-VRQLLAQHQVDPGTAFALRGSGGMAKAVASALRDAGFAEGI 150

Query: 152 VTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSR 211
           +  R      QLA+ V  Y  V     E       +++N T   + G L A + + F   
Sbjct: 151 IVARNEQAGRQLAD-VCGYRWVP----EPGDICPPMLVNVTPIGMAGGLEA-EELAFPEH 204

Query: 212 SVC-----YDMMYGKGYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQI 266
           ++      +D++     T   + A+  G    I GL ++  QA E F+L+ G+RP  +Q+
Sbjct: 205 AIAAAERVFDVVAMPAQTPLIRRAQALG-KPVITGLEVIALQALEQFVLYTGVRPTREQV 263