Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., shikimate dehydrogenase-related enzyme from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 2e-61
 Identities = 118/274 (43%), Positives = 173/274 (63%), Gaps = 8/274 (2%)

Query: 6   DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVT 65
           D+YAV G PINH+KSP IH LFA+ + Q + Y A    +D F      F ++GG+G N+T
Sbjct: 3   DRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNIT 62

Query: 66  VPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVL---LK 122
            PFK  A+  ADR +ERA+LA A N LK  +DG I+ +N DG GL++D+  ++ L   L+
Sbjct: 63  APFKLRAFELADRRSERAQLARAANALK-FEDGRIVAENFDGIGLLRDI--EENLGEPLR 119

Query: 123 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK 182
              +LL+GAGGA RG L P L   P+ + + NR  AKA  L   +  +  ++   +E L+
Sbjct: 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD-HSRLRISRYEALE 178

Query: 183 -QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDG 241
            QS+D+++N+TSASL  +LP +   +    ++ Y++ YGKG T F + AR+ G A+  DG
Sbjct: 179 GQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQARLADG 238

Query: 242 LGMLVGQAAESFMLWRGLRPGTKQILRELRKNLE 275
           +GMLV QAAE+F  WRG+RP T+ ++ +L   LE
Sbjct: 239 VGMLVEQAAEAFAWWRGVRPDTRAVINQLTIPLE 272