Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Shikimate dehydrogenase family protein from Pseudomonas putida KT2440

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)

Query: 9   AVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFA------QGGRGC 62
           A+ G+PI   KSP     +      ++      +P+D   EAA   FA      Q  RGC
Sbjct: 10  AIVGSPIAQVKSPQNFNTWFNHNNCNLAM----LPID-LHEAALDSFADTLRGWQNLRGC 64

Query: 63  NVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLK 122
            VTVP+K+      D L+ERA   G++N +++  DG +LGDN DG G +           
Sbjct: 65  VVTVPYKQALANRVDGLSERAAALGSINVIRRERDGRLLGDNVDGAGFLGAAHKHGFEPA 124

Query: 123 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELV--AAYGEVKAQAFEQ 180
           G   L+IG GG    +   L +   ASIT+ + + A+   + EL+     G   +  F  
Sbjct: 125 GKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSG 184

Query: 181 LKQSYDVIINSTSASLD--GELPAIDPVIFSSR--SVCYDMMYGKGYTVFNQWARQHGC 235
           L + +D++ N++   +    ELP    ++ + +  ++  D++     T     ARQ GC
Sbjct: 185 L-EDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEITPLLNRARQVGC 242