Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., putative quinate/shikimate dehydrogenase from Pseudomonas putida KT2440

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 24/274 (8%)

Query: 1   MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVD----------GFTEA 50
           M+ Q     + G  I  S++P +H        Q++ Y  + +  D          G  EA
Sbjct: 1   MSQQAILAGLIGRGIQLSRTPALHE--HEGDAQALRYLYRLIDADQLQLDDSALPGLLEA 58

Query: 51  AKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGL 110
           A+H    G  G N+T PFK+      D L++ AR  GAVNT+  L DG+ +G NTD  G 
Sbjct: 59  AQH---TGFTGLNITYPFKQAILPLLDELSDEARGIGAVNTV-VLKDGKRVGHNTDCLGF 114

Query: 111 VQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE-LVAA 169
            + L      +    ++ +GAGGA   V   LL +    + +      +A+ L + L   
Sbjct: 115 AEGLRRGLPDVARRQVVQMGAGGAGSAVAHALLGEGVERLVLFEVDATRAQALVDNLNTH 174

Query: 170 YGEVKAQAFEQLKQSY---DVIINSTSASLDGELPAID-PV-IFSSRSVCYDMMYGKGYT 224
           +G  +A     L  +    D ++N+T   +  +LP    PV +   R    +++Y    T
Sbjct: 175 FGAERAVLGTDLATALAEADGLVNTTPVGM-AKLPGTPLPVELLHPRLWVAEIIYFPLET 233

Query: 225 VFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRG 258
              + AR  GC + +DG  M V QA ++F L+ G
Sbjct: 234 ELLRAARALGC-RTLDGSNMAVFQAVKAFELFSG 266