Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., shikimate dehydrogenase from Paraburkholderia sabiae LMG 24235

 Score =  227 bits (579), Expect = 2e-64
 Identities = 121/276 (43%), Positives = 168/276 (60%), Gaps = 7/276 (2%)

Query: 6   DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTA---QCVPVDGFTEAAKHFFAQGGRGC 62
           DQYAV GNPI H+KSP IH LFA +T+Q M Y A      P   F +  + F A GG+G 
Sbjct: 3   DQYAVIGNPIGHTKSPLIHGLFAEETRQDMAYAAIEGPLEPEQAFADVVRAFAASGGKGM 62

Query: 63  NVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVL-L 121
           NVT PFK +A+  AD  +ERA LAGAVN +K  ++G ++ +N DG GLV+D+     L +
Sbjct: 63  NVTAPFKLKAFAMADERSERAELAGAVNAMK-FENGRVIAENFDGIGLVRDIEVNLGLKM 121

Query: 122 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQL 181
            G  +L++GAGGA RG L P L  +P  + + NR   K + L   + A   +KA  +  L
Sbjct: 122 AGKRVLILGAGGAVRGALLPFLAARPVEMIIVNRDVVKGKALVAQIGACDSLKACGYGDL 181

Query: 182 KQS--YDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAI 239
           +    +D+++N+TSASL G+LP + P +FS     Y++ YGK  T F + AR  G +   
Sbjct: 182 ETMGRFDLVVNATSASLTGDLPPVPPSVFSPDGAAYELAYGKRLTPFLRLARNAGVSMIA 241

Query: 240 DGLGMLVGQAAESFMLWRGLRPGTKQILRELRKNLE 275
           DG+GMLV QAAE+F  WRG+RP T+ ++  L   LE
Sbjct: 242 DGVGMLVEQAAEAFDWWRGVRPATRAVIDRLTVPLE 277