Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 5/267 (1%)

Query: 9   AVFGNPINHSKSPFIHTLFARQTQ-QSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVP 67
           A  G P +  KSP I+  +  Q    +++    C P D        F     RG  +T+P
Sbjct: 10  AHIGYPTHTFKSPMIYNPYFEQVGVNAVVVPMGCQPPDYPAFLKSVFTLTNIRGALITMP 69

Query: 68  FKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATIL 127
            K       D +T   ++AGA N +K+  DG ++GD  DG G V+ +  + + L GA +L
Sbjct: 70  HKVATVGLIDEVTPTVKVAGACNAVKRTADGRLVGDMFDGAGFVRGVQRKGLNLNGARVL 129

Query: 128 LIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE-LVAAYGEVKAQAFEQLKQSYD 186
           ++G+GG    +   L      +I + +   A A+ L + L   Y  ++           D
Sbjct: 130 VVGSGGVGSAIAASLAGAGIGAIALYDVNAASAQALGQRLKTHYPAIEVSTGSNDPAGLD 189

Query: 187 VIINSTSASL-DGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGML 245
           +++N+T   + +G+   +D     +R+   +++     T F   AR  GC   + G  ML
Sbjct: 190 LVVNATPMGMNEGDPLPMDVTRLEARTFVGEVVMRTEMTAFLSAARARGCPVQV-GSDML 248

Query: 246 VGQAAESFMLWRGLRPGTKQILRELRK 272
             Q   +++ + GL   T ++LR + K
Sbjct: 249 FEQ-IPAYLEFFGLPTTTAEVLRSVAK 274