Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., shikimate dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  108 bits (270), Expect = 1e-28
 Identities = 86/265 (32%), Positives = 120/265 (45%), Gaps = 9/265 (3%)

Query: 10  VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFK 69
           V G P++HS+SP +H  +  Q      Y    V  +      +     G  G NVTVP K
Sbjct: 12  VLGWPVSHSRSPRLHGFWLEQMGIDGAYLPLAVAPEHLETVIRALPRMGFAGANVTVPHK 71

Query: 70  EEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLK--GATIL 127
           E   R  D L   AR  GAVNTL    DG + G NTD  G  ++L     L +       
Sbjct: 72  EAVMRLVDHLDPLARRIGAVNTLVVRQDGTLEGRNTDAYGFFENLRQGCPLWEPTSGPAA 131

Query: 128 LIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYD- 186
           +IGAGGAAR V+  L D     I + NR+  +A  LA  +   G V    + +  +S + 
Sbjct: 132 VIGAGGAARAVVAALADAGVPEIRLANRSRERAATLAADLG--GPVTVVDWAERAESLEG 189

Query: 187 --VIINSTSASLDGELPA-IDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLG 243
             +++N+T+  + G+    +D     + SV  D++Y    T     A   G    +DGLG
Sbjct: 190 CALLVNTTTLGMTGQSSLDLDLAALPTTSVVNDIVYVPLVTDLLARATARG-NPIVDGLG 248

Query: 244 MLVGQAAESFMLWRGLRPGTKQILR 268
           ML+ QA   F  W G RP     LR
Sbjct: 249 MLLHQAVPGFEAWFGQRPQVSDQLR 273