Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., shikimate dehydrogenase from Escherichia coli ECRC62

 Score =  267 bits (683), Expect = 2e-76
 Identities = 137/271 (50%), Positives = 181/271 (66%), Gaps = 2/271 (0%)

Query: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           ++ YAVFGNPI HSKSPFIH  FA+Q      Y     P++ F      FF  GG+G NV
Sbjct: 1   METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFRAGGKGANV 60

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA 124
           TVPFKEEA+  AD LTERA LAGAVNTLK+L+DG +LGDNTDG GL+ DL     +  G 
Sbjct: 61  TVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLSFIRPGL 120

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK-Q 183
            ILLIGAGGA+RGVL PLL     ++T+TNRT ++AE+LA+L A  G ++A   ++L+  
Sbjct: 121 RILLIGAGGASRGVLLPLLSLD-CAVTITNRTVSRAEELAKLFAHTGSIQALGMDELEGH 179

Query: 184 SYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLG 243
            +D+IIN+TS+ + G++PAI   +      CYDM Y KG T F  W  Q G  +  DGLG
Sbjct: 180 EFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLG 239

Query: 244 MLVGQAAESFMLWRGLRPGTKQILRELRKNL 274
           MLV QAA +F+LW G+ P  + ++++L++ L
Sbjct: 240 MLVAQAAHAFLLWHGVLPDVEPVIKQLQEEL 270