Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., shikimate dehydrogenase from Dickeya dadantii 3937

 Score =  240 bits (613), Expect = 2e-68
 Identities = 125/268 (46%), Positives = 172/268 (64%), Gaps = 2/268 (0%)

Query: 8   YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVP 67
           +AVFG+PI HSKSP IH LFA Q   S+ Y     P+DGF ++ K FF  G  G NVT P
Sbjct: 7   FAVFGHPIAHSKSPRIHALFAEQMGISLTYERILAPLDGFEDSLKAFFQHGACGANVTAP 66

Query: 68  FKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATIL 127
           FKE A    D L+ERAR AGAVNT++K  DG + GDNTDG GL+ DL   + +     +L
Sbjct: 67  FKERACAAMDELSERARSAGAVNTIQKKVDGSLYGDNTDGIGLLSDLQQHEFIQPHDRVL 126

Query: 128 LIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQL-KQSYD 186
           L+GAGGAARGV++PLL      + +TNRTFA+A+ LAE  + YG+V A   E++   S+D
Sbjct: 127 LVGAGGAARGVIQPLL-AYGCELVITNRTFARADALAEHFSRYGQVSALPMEKVGNHSFD 185

Query: 187 VIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGMLV 246
           +IIN+TS+ + G++P +   + S    CYDM Y    T F +W  + G  + +DG+GMLV
Sbjct: 186 LIINATSSGVAGDVPDLPVSLISPDVCCYDMFYQSEPTPFLKWCIRQGAQRYVDGMGMLV 245

Query: 247 GQAAESFMLWRGLRPGTKQILRELRKNL 274
            QAA +F LW G+ P    ++R++++ L
Sbjct: 246 WQAAHAFNLWHGVMPDAVPVIRKMKQEL 273