Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Shikimate dehydrogenase from Alteromonas macleodii MIT1002

 Score =  201 bits (510), Expect = 2e-56
 Identities = 121/253 (47%), Positives = 157/253 (62%), Gaps = 4/253 (1%)

Query: 26  LFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR-GCNVTVPFKEEAYRFADRLTERAR 84
           +FA Q  + + Y     PVDGF +AA  F AQ G  GCNVT+PFK +A+  A    + A+
Sbjct: 1   MFAEQVGEKISYEKILAPVDGFVDAANAFLAQEGAVGCNVTMPFKLDAFNLAKVDDQAAK 60

Query: 85  LAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD 144
            A AVNTL   D GEI G NTDG GLV DLL   V +KG  +LLIGAGGAARGV+ PLL 
Sbjct: 61  DAQAVNTLMNGDSGEIWGYNTDGVGLVNDLLNSGVEIKGKRVLLIGAGGAARGVISPLLK 120

Query: 145 QQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQ-SYDVIINSTSASLDGELPA- 202
              AS+T+TNRT AKAE++A   A+  +V+  A E +   +  +IINST+ASL  ELP  
Sbjct: 121 AGAASLTITNRTKAKAEEVAS-AASNAKVQVAALEDIADVAPHIIINSTAASLSNELPCR 179

Query: 203 IDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPG 262
           ++  +  +  V YDM+Y    T F + A + G    IDGLGMLV QAAE+F +W   RP 
Sbjct: 180 LNDGVLQNCEVVYDMVYKNSPTRFMRDAAELGVKTQIDGLGMLVEQAAEAFYIWTQKRPD 239

Query: 263 TKQILRELRKNLE 275
           T  I++ +R  +E
Sbjct: 240 TSDIVKRVRAIVE 252