Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score =  122 bits (307), Expect = 7e-33
 Identities = 91/268 (33%), Positives = 137/268 (51%), Gaps = 10/268 (3%)

Query: 10  VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTE---AAKHFFAQGGRGCNVTV 66
           V G PI HS+SP IH+ + ++   +  YTA  V  D F +     K        G N T+
Sbjct: 14  VVGYPIKHSRSPIIHSYWLKKFGIAGSYTAVEVSPDDFPKFIATLKEGKPGAAVGGNATI 73

Query: 67  PFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQV-LLKGAT 125
           P KE AYR AD     A   GA NT+  +++G++   NTDG G V +L  +     K   
Sbjct: 74  PHKEAAYRLADHPDALAEELGAANTI-WMEEGKLHATNTDGYGFVSNLDERHPGWDKTQR 132

Query: 126 ILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA--AYGEVKAQAFEQLKQ 183
            ++ GAGGA+R V++ L D+  A I V NRT  +A +LA+      +   +A A +++  
Sbjct: 133 AVVFGAGGASRAVIQSLRDRDVAEIHVVNRTVERARELADRFGPRVFSHPQA-ALQEVMH 191

Query: 184 SYDVIINSTSASLDG-ELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGL 242
              + +N+TS  ++G E P +D    ++ +V  D++Y    T     A++ G A  +DGL
Sbjct: 192 GAGLFVNTTSLGMNGTEAPHLDFSHLAANAVVTDIVYVPLKTPILNMAQEQGIA-TVDGL 250

Query: 243 GMLVGQAAESFMLWRGLRPGTKQILREL 270
           GML+ QA   F  W G  P   + LR L
Sbjct: 251 GMLLHQAKPGFRRWFGRIPEVDETLRSL 278