Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 23/152 (15%)

Query: 14  AHEHALQSSPCPQCGAALQLRHGKHGPFLGCTAY-----PECDYIKPLHQNDGHIIKELG 68
           A++  + + PC +CG  + +R    G FLGC+ Y       C     L   D     + G
Sbjct: 593 ANQPTMTNIPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEG 652

Query: 69  VP----------CPEC--GHELVLRQGRYGMFIGCSHYPQC--HHIESMDSPSQEETSPD 114
                       CP C    +  L   ++ + I C + P C  + IE  +   +    P 
Sbjct: 653 ESESRVLLGKHRCPICATAMDAYLLDEKHKLHI-CGNNPDCVGYEIEEGNYRIKGYEGPS 711

Query: 115 ILCPECGKGHLIERKSRFGKLFYACDAYPKCK 146
           + C +CG   +  +  RFGK F+ C   P CK
Sbjct: 712 LECDKCG-SEMQLKTGRFGK-FFGC-TNPACK 740



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 21  SSPCPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQNDGHIIKELG------VPCPEC 74
           S  C +CG+ +QL+ G+ G F GCT  P C   + L ++      ++       + C + 
Sbjct: 711 SLECDKCGSEMQLKTGRFGKFFGCTN-PACKNTRKLLKSGEAAPPKMDKVDMPELKCEKV 769

Query: 75  GHELVLRQGRYGMFIGCSHYPQ 96
               VLR G  G+F+  S +P+
Sbjct: 770 DDTYVLRDGASGLFLAASQFPK 791