Pairwise Alignments

Query, 371 a.a., DNA-protecting protein DprA from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  251 bits (641), Expect = 2e-71
 Identities = 164/372 (44%), Positives = 216/372 (58%), Gaps = 13/372 (3%)

Query: 5   DLAAWLALCFTPKLGSKTISHLLAT-RLPAQLQSFTPKQWLAC--GLKPEQLVFLTTQAA 61
           +LAAWL L  TP +G  +   LLA   LP  + +     W A       + L        
Sbjct: 5   ELAAWLRLLLTPGVGLDSARKLLAAFGLPEAVFAQPAPAWQAVVGARAADALQQPPEDLE 64

Query: 62  KQAEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPVLFIEGIWEAVHDPA-VAIVGS 120
            Q ++   W +   +R+++T   PLYP  L ++   P +L++ G  +A+H P  +AIVGS
Sbjct: 65  AQVDRTEAWLAEGPDRHLLTLGDPLYPPDLLQMADPPVLLYVLGQVQALHHPRRLAIVGS 124

Query: 121 RNASVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVY 180
           RN +  G   ARQFA  L Q+ + V SGLALGIDG AHDGAL     TVAV+G+GL +VY
Sbjct: 125 RNPTPQGETNARQFAQALGQAEVCVVSGLALGIDGAAHDGALLGGAPTVAVVGTGLDRVY 184

Query: 181 PKQHQGLAERIIAQGALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLIT 240
           PK+H  LA RI  QGA+VSE+   TPP   HFP+RNRII+GLS G +VVEAA +SGSLIT
Sbjct: 185 PKRHLALAHRIAMQGAIVSEYPLGTPPLPAHFPQRNRIIAGLSQGTLVVEAAVQSGSLIT 244

Query: 241 ARYAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQVP 300
           AR A EQGREVF +PGSI    S+G + LIRQGA LV+S Q I ++L      S  +   
Sbjct: 245 ARMAVEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQDILEDLHFVPPASPRDD-G 303

Query: 301 YQATLFSAVQSDEELPFPELLANVGIEATPIDILASRTQIPVQDIMMQLLELELLGHVVA 360
              T  SA +         LL  +G +   +D L +RT +    +   LLELEL G V  
Sbjct: 304 EPGTRDSANED-------SLLKAMGHDPVSLDALQARTGLDTAHLQAHLLELELSGEVAR 356

Query: 361 VPGGYI-RKGRG 371
           +PGG + R+G+G
Sbjct: 357 LPGGLLQRQGQG 368