Pairwise Alignments

Query, 391 a.a., LysM peptidoglycan-binding domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., LysM peptidoglycan-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  149 bits (375), Expect = 2e-40
 Identities = 101/362 (27%), Positives = 164/362 (45%), Gaps = 55/362 (15%)

Query: 48  LKPNAPTTYTVVKGDTLWDISALYLDSPWLWPRLWQVNPEIDNPHLIYPGDKLTLFWRDG 107
           L+ + P +YTV +GDTLWDISA +L  PWLWP +WQ NP++ NPHLIYPGD L L + +G
Sbjct: 25  LRADHPDSYTVRRGDTLWDISAKFLSKPWLWPEIWQANPQVRNPHLIYPGDVLNLSFING 84

Query: 108 QPELSLKPMRKLSPQVRVLEKQAVPTVQEGLVLPYLQSDRLMAKTALQGSVRVIGSSEGR 167
            P L L+P           E +AVP +    +  +L+  R+M   A+  +  V+G  E R
Sbjct: 85  -PRLGLQPSVH-------REGEAVPAIPLSELRMFLKDMRVMDSKAVSSAPYVVGLEESR 136

Query: 168 QYLTKQDQLYISGVHSE--KKWGIY----------------------------------- 190
                   +Y+ G+  E  ++W I                                    
Sbjct: 137 LRGAVGQNIYVRGLQGEPGQRWAIVRPSHVFRGFNQGDAASADLVAHDLDSNAAMVNAPW 196

Query: 191 ----REVAQYQRDDEVMVALRLVAVGELAMTGGNFSGLSLLEQNQEILANDIALPEVDLE 246
               R    Y + D++ V + ++   E   T G+ + L LL   QEI + D  +P   ++
Sbjct: 197 REDSRNDGHYGKGDDLGVEVSVIGTAETLRT-GDPATLLLLGATQEIRSGDRIMP---ID 252

Query: 247 ERQLSTTFYPQ-PAPAGSEARILGSLEGSQYAGQNQVVVIDQGRSDGVAQGSMFELYQAA 305
           ++     +YP  P    + A+++G  +    AG  QVV++  G  DGV  G  + + Q  
Sbjct: 253 DKPYDAYYYPHAPKSVPANAKVIGFADAMDAAGSRQVVMLSIGAKDGVDNGQTYTMMQPG 312

Query: 306 VQVKAKQDSSTFLSERSNTDVQLPSVKVGALMVIRPYERFSLALITNSSAPISAEVHALS 365
             +     S+++        V+LP   +G +MV R ++R S  L+ +   P+      + 
Sbjct: 313 ETIHDDVASNSW-RRGVGEKVKLPDEYIGHVMVFRTFDRVSYGLVMDGLRPVHVGSRLVL 371

Query: 366 PQ 367
           P+
Sbjct: 372 PE 373