Pairwise Alignments

Query, 391 a.a., LysM peptidoglycan-binding domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., Uncharacterized protein with LysM domain, COG1652 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  127 bits (320), Expect = 4e-34
 Identities = 106/370 (28%), Positives = 171/370 (46%), Gaps = 62/370 (16%)

Query: 31  FTLLSGQ-VTADEQT----PLA-LKPNAPTTYTVVKGDTLWDISALYLDSPWLWPRLWQV 84
           F +  GQ  TAD+      PL+ L PNAP +YTV +GDTLW IS ++L +PW WP LW +
Sbjct: 40  FPVTQGQRATADQVAQNGVPLSELAPNAPDSYTVQRGDTLWAISGVFLKTPWRWPELWGM 99

Query: 85  N-PEIDNPHLIYPGDKLTLFWRDGQPELSLKPMR-------KLSPQVRV--LEKQAVPTV 134
           N  EI NPH IYPG  L L     +  LS +P         ++SP+ R   L   A+P V
Sbjct: 100 NRAEIQNPHRIYPGQMLYLIKSGDRAMLSTRPANGGDTSTVRVSPRTRYESLSDSAIPPV 159

Query: 135 QEGLVLPYLQSDRLMAKTALQGSVRVIGSSEGRQYLTKQDQLYISGVHSEKKWGIYREVA 194
               +  +L    ++ +     + R++ + E R  LT+ D+ Y   ++ +        V 
Sbjct: 160 SLQAIESFLTEPMIVDEATFARAPRIVATQEHRVLLTRGDRAYARALYGDGPQSEPLRVV 219

Query: 195 QYQRDDEVM----VALRLVAVGELAMTGGNFSG--------------------------- 223
           + Q  D  +      LR     E+      + G                           
Sbjct: 220 EGQSIDHRVFRNATPLRDPTTNEILGYEAQYVGKAQLVSSESQRPAADGNGKTPAEIVPA 279

Query: 224 -LSLLEQNQEILANDIALPEVDLEERQLSTTFYPQPAPAGSEARILGSLEGS--QYAGQN 280
            + ++   +EI   D  LPE    ER+LS  F P+ AP+  +   + S+ G+  +YA QN
Sbjct: 280 TIDIVAAKEEIRVGDRLLPE---PERELS-NFVPR-APSTPQNGQIVSVYGNAVRYAAQN 334

Query: 281 QVVVIDQGRSDGVAQGSMFELYQAAVQVKAKQDSSTFLSERSNTDVQLPSVKVGALMVIR 340
           QVV I++GR+ G+ +G +  L       + +    T  ++++   ++LP  + G +MV R
Sbjct: 335 QVVTINRGRAHGIERGHVLAL-------QKESGLFTDTTDQTRPQLRLPGERNGLMMVFR 387

Query: 341 PYERFSLALI 350
            +++ S AL+
Sbjct: 388 TFDKVSYALV 397