Pairwise Alignments

Query, 391 a.a., LysM peptidoglycan-binding domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  147 bits (372), Expect = 4e-40
 Identities = 102/356 (28%), Positives = 164/356 (46%), Gaps = 45/356 (12%)

Query: 45  PLALKPNAPTTYTVVKGDTLWDISALYLDSPWLWPRLWQVNPEIDNPHLIYPGDKLTLFW 104
           P +LK +AP  Y V +GDTLWDI+  +L  PW WP +W  N  + NPH IYPGD+L L  
Sbjct: 45  PPSLKASAPNVYVVKRGDTLWDIAGKFLSKPWRWPEIWASNKHVKNPHWIYPGDRLLLCT 104

Query: 105 RDGQPELSLKP-------------MRKLSPQVRVLE-KQAVPTVQEGLVLPYLQSDRLMA 150
            DG+P +                    + PQ+RV     A+P +    +  +L+   +M+
Sbjct: 105 LDGRPLIGKDEGDGCEGIIRRYGGQTSMQPQIRVESLNNAIPVIPLEHIRVWLERTLIMS 164

Query: 151 KTALQGSVRVIGSSEGRQYLTKQDQLYI--SGVHSEKKWGIYREVAQYQRDD------EV 202
             ++  +  ++G+++ R        +Y   +G+   +++ +YRE   Y   D        
Sbjct: 165 PDSVINTPYILGTADNRVLAAAGQTVYARGNGLQVGQRYAVYREGEPYIFTDANGKSYNA 224

Query: 203 MVALRLVAVGELAMTGGNFSGLSLLEQ-NQEILANDIALPEVDLEERQLSTTFYP----Q 257
            V L  VA G       + + L L +  N E+   D  +PE D     L T FYP    Q
Sbjct: 225 GVELLQVASGVAVQNEQDITTLELTQSYNGEVRRGDRVMPEYD---PMLPTLFYPTIDHQ 281

Query: 258 PAPAGSEARILGSLEGSQYAGQNQVVVIDQGRSDGVAQGSMFELYQAAVQVKAKQDSSTF 317
               G   R++GS+     A ++ VV +++G   GV  G +F +YQ    V+        
Sbjct: 282 VTEGGQVIRVMGSI---GTAARHSVVTVNRGNIHGVQSGQVFSVYQQGEVVR-------- 330

Query: 318 LSERSNTDVQLPSVKVGALMVIRPYERFSLALITNSSAPISAEVHALSPQAEPQTE 373
              ++   ++LPS KVG +M+ R +++ S A + +S+ PI         QA P  E
Sbjct: 331 -DPKTREQIKLPSQKVGNIMIFRTFDQLSYAYVLDSALPIKV---GSGIQAPPMAE 382