Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., rRNA methyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 31/287 (10%)

Query: 156 EQWQQIVEANNSKAPMWLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVH 215
           +++QQ + A     P+ +RVN    T A        AG+   P A A   L +     + 
Sbjct: 18  QEYQQFLNALQQTPPVSIRVNKAKATAA--------AGLAAVPWAAAGRYLPVRPSFTLD 69

Query: 216 QLPGFAEGWVSVQDAAAQLALTYLAPQAGEL-----ILDCCAAPGGKTAHILERTPE-SQ 269
             P    G   VQ+A++      L  QA  L     +LD C APGGK+ H+     E S 
Sbjct: 70  --PAIHAGAYYVQEASSMFVEQALR-QAVNLEQPLQVLDLCGAPGGKSTHLASLISEDSL 126

Query: 270 VVAIDCDETRLKRVRENLQRLELTAQVICGDARYPQQWWQ-GEQFDRILLDAPCSATGVI 328
           +V+ +   +R   + EN+ +      ++  +   P+ + +  + FD +++DAPCS  G+ 
Sbjct: 127 LVSNEVIRSRASILAENVAKWGSGNVLVTSND--PRDFGRLPDFFDVMVVDAPCSGEGMF 184

Query: 329 RRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQV----- 383
           R+ P        +++   A+ Q+ IL  +W  LKPGG LVY+TC+   QEN   V     
Sbjct: 185 RKDPQAVQEWSEENVKLCAQRQQRILMDVWDALKPGGLLVYSTCTWNEQENEENVAWLSE 244

Query: 384 -----KAFLERTPDARLVGSE-PAQPGRQILPGEEAMDGFYYAVLSK 424
                   LE  P+  +V ++     G +  P     +GF+ AV+ K
Sbjct: 245 QEGVESIRLELQPEWGVVPTQLGGVEGYRFYPHRVQGEGFFMAVVRK 291