Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 27/255 (10%)

Query: 143 PGWLLKLLKESYPE--QWQQIVEANNSKAPMWLRVNHQHHTRAEYQALLEQAGIVTTPHA 200
           P   L  ++E+ P    + + + A        +R+N    + A++ AL+   G   TP  
Sbjct: 43  PDAFLTQMREAMPSTLSFDEFISACQRPLRRSIRINTLKISVADFLALIAPYGWSLTPIP 102

Query: 201 QAEDALCLETPCDVHQLP-----GFAEGWVSVQDAAAQLALTYLAPQAG--ELILDCCAA 253
              +   +E   D   LP         G   +Q+A++ L +  L       + ++D  AA
Sbjct: 103 WCHEGFWIERD-DEEALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNHPQRVMDMAAA 161

Query: 254 PGGKTAHILERTPE-SQVVAIDCDETRLKRVRENLQRLELTAQVICGDARYPQQWWQG-- 310
           PG KT  I  R      ++A +   +R+K +  N+ R        CG A      + G  
Sbjct: 162 PGSKTTQIAARMGNRGAILANEFSASRVKVLHANISR--------CGIANTALTHFDGRV 213

Query: 311 ------EQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPG 364
                 E FD ILLDAPCS  GV+R+ PD       +    +A  QRE+LD+ +  L+PG
Sbjct: 214 FGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNLDIAATQRELLDSAFHALRPG 273

Query: 365 GSLVYATCSITPQEN 379
           G+LVY+TC++  QEN
Sbjct: 274 GTLVYSTCTLNRQEN 288