Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  518 bits (1335), Expect = e-151
 Identities = 261/425 (61%), Positives = 316/425 (74%), Gaps = 2/425 (0%)

Query: 2   NVRAAAASALYQVVDLGHSLSNALPAAQQQIRPRDHALLQEICYGVLRQLPRLESISQAL 61
           N+R+ AA A+ QVV+ G SLSN LP  QQ++  +D ALLQE+C+GVLR L +LE +   L
Sbjct: 6   NLRSLAAQAVEQVVEQGQSLSNVLPPLQQKVADKDKALLQELCFGVLRTLSQLEWLINKL 65

Query: 62  MGKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNY 121
           M +P+ GKQR  H+LI+VG YQL + R+P HAA+ ETVEGA  +K P+L+GLIN VLR +
Sbjct: 66  MSRPMTGKQRTVHYLIMVGFYQLLYTRVPPHAALAETVEGAVSIKRPQLKGLINGVLRQF 125

Query: 122 QRDQEGLDAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHHT 181
           QR QE L  +  + DA R+ HPGWL+K L+ +YP QWQ I+EANN + PMWLRVN  HHT
Sbjct: 126 QRQQETLLNEFATSDA-RFLHPGWLVKRLQNAYPTQWQHIIEANNQRPPMWLRVNRTHHT 184

Query: 182 RAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAP 241
           R  +  LLE AG+   PH    DA+ LETP  VH LPGFAEGWV+VQDA+AQ    +LAP
Sbjct: 185 RDGWLGLLEDAGMKGYPHPDYPDAVRLETPAPVHALPGFAEGWVTVQDASAQGCAVFLAP 244

Query: 242 QAGELILDCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLELTAQVICGDA 301
           Q GE ILD CAAPGGKT HILE  PE+ V+A+D DE RL RV +NL+RL + A V  GD 
Sbjct: 245 QNGEHILDLCAAPGGKTTHILEVAPEADVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304

Query: 302 RYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQL 361
           RYP QW   +QFDRILLDAPCSATGVIRRHPDIKWLRR  DIA LA+LQ EILDA+W +L
Sbjct: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILDAVWPRL 364

Query: 362 KPGGSLVYATCSITPQENRLQVKAFLERTPDARLVGS-EPAQPGRQILPGEEAMDGFYYA 420
           KPGG+LVYATCS+ P+ENR Q+K FL+RTPDA L  +  P QPG+Q LPG E  DGF+YA
Sbjct: 365 KPGGTLVYATCSVLPEENRDQIKTFLQRTPDAALSETGTPDQPGQQNLPGGEEGDGFFYA 424

Query: 421 VLSKQ 425
            L K+
Sbjct: 425 KLIKK 429