Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) from Escherichia coli BW25113

 Score =  524 bits (1349), Expect = e-153
 Identities = 264/425 (62%), Positives = 321/425 (75%), Gaps = 2/425 (0%)

Query: 2   NVRAAAASALYQVVDLGHSLSNALPAAQQQIRPRDHALLQEICYGVLRQLPRLESISQAL 61
           N+R+ AA A+ QVV+ G SLSN LP  QQ++  +D ALLQE+C+GVLR L +L+ +   L
Sbjct: 6   NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65

Query: 62  MGKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNY 121
           M +P+ GKQR  H+LI+VGLYQL + RIP HAA+ ETVEGA  +K P+L+GLIN VLR +
Sbjct: 66  MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125

Query: 122 QRDQEGLDAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHHT 181
           QR QE L A+  + DA RY HP WLLK L+++YPEQWQ IVEANN + PMWLR+N  HH+
Sbjct: 126 QRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184

Query: 182 RAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAP 241
           R  + ALL++AG+   PHA   DA+ LETP  VH LPGF +GWV+VQDA+AQ  +T+LAP
Sbjct: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244

Query: 242 QAGELILDCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLELTAQVICGDA 301
           Q GE ILD CAAPGGKT HILE  PE+QVVA+D DE RL RV +NL+RL + A V  GD 
Sbjct: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304

Query: 302 RYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQL 361
           RYP QW   +QFDRILLDAPCSATGVIRRHPDIKWLRR  DI  LA+LQ EILDA+W  L
Sbjct: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364

Query: 362 KPGGSLVYATCSITPQENRLQVKAFLERTPDARLVGS-EPAQPGRQILPGEEAMDGFYYA 420
           K GG+LVYATCS+ P+EN LQ+KAFL+RT DA L  +  P QPG+Q LPG E  DGF+YA
Sbjct: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424

Query: 421 VLSKQ 425
            L K+
Sbjct: 425 KLIKK 429