Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Fusobacterium nucleatum SB010

 Score =  170 bits (430), Expect = 9e-47
 Identities = 135/443 (30%), Positives = 216/443 (48%), Gaps = 31/443 (6%)

Query: 1   MNVRAAAASALYQVVDLGHSLSNALPAAQQ--QIRPRDHALLQEICYGVLRQLPRLESIS 58
           MNV+  A + + QV D G   + AL    +   I  ++   + EI YGVLR    L+ I 
Sbjct: 1   MNVKQVAINLISQV-DKGAYSNIALNETFKTLDINSKEKTFITEIFYGVLRNKKFLDYII 59

Query: 59  QALMGKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVL 118
           +    +    K+     L+ + +YQ++FM       V E  E  +   G  +   IN  L
Sbjct: 60  ERYTKEI---KKEWIRNLLRISIYQITFMNSDDKGVVWEATELVKKKYGMTISKFINGTL 116

Query: 119 RNYQRDQEGLDAQATSHDAGR-----YGHPGWLLKLLKESYPEQWQQIVEANNSKAP-MW 172
           RNY R++   D +    D  +     Y  P W   +L++ Y +   +    +  K P + 
Sbjct: 117 RNYLRNK---DTELKRLDDEKNYEVLYSIPKWFYDILEKQYGDNNLKKAITSLKKIPYLS 173

Query: 173 LRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAA 232
           +RVN   ++  E++  L++  I         D +       +     F  G +  QDA++
Sbjct: 174 VRVNKLKYSEEEFEEFLKEKDIQIIKKV---DTVYYVNSGLIINSEEFKTGKIIAQDASS 230

Query: 233 QLALTYLAPQAGELILDCCAAPGGKTAHILERTP-ESQVVAIDCDETRLKRVRENLQRLE 291
            LA   L+    EL+LD CAAPGGKTA + E+   + +++AID  + ++K +  N+++L 
Sbjct: 231 YLAAKNLSVMPNELVLDICAAPGGKTAVLAEQMENKGEIIAIDIHQHKIKLIETNMKKLG 290

Query: 292 LT-AQVICGDARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQ 350
           +   + I  DAR   +  QG +FD+IL+D PCS  GVIR+ P+I + +  ++I  LA+LQ
Sbjct: 291 IDIVKAIVMDARNVNK--QGRKFDKILVDVPCSGYGVIRKKPEILYSKNRENIEELAKLQ 348

Query: 351 REILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERTPDAR---------LVGSEPA 401
            EIL++    LK GG LVY+TC+IT +EN   ++ FL+   + +         + G    
Sbjct: 349 LEILNSAADILKNGGELVYSTCTITDKENTDNIEKFLKERKEFKVEKLYIPENISGDYDK 408

Query: 402 QPGRQILPGEEAMDGFYYAVLSK 424
             G  I   EE MD FY   L K
Sbjct: 409 LGGFCINYKEEIMDNFYIIKLKK 431