Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase from Enterobacter asburiae PDN3

 Score =  490 bits (1261), Expect = e-143
 Identities = 248/420 (59%), Positives = 306/420 (72%), Gaps = 2/420 (0%)

Query: 7   AASALYQVVDLGHSLSNALPAAQQQIRPRDHALLQEICYGVLRQLPRLESISQALMGKPL 66
           AA A+ QV++ G SLSN LP  QQ++  +D ALLQE+C+GVLR L +LE +   LM +P+
Sbjct: 2   AAQAVEQVIEQGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLINKLMSRPM 61

Query: 67  KGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNYQRDQE 126
            GKQR  H+LI+VG YQL   RIP HAA+ ETVEGA  +K P+L+GLIN VLR +QR QE
Sbjct: 62  TGKQRTVHYLIMVGFYQLLHTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQE 121

Query: 127 GLDAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHHTRAEYQ 186
            L A+    +A R+ HP WLLK LK++YP+QWQ+I +ANN + PMWLRVN  HH+R  + 
Sbjct: 122 ELLAEFAQSEA-RFLHPDWLLKRLKKAYPQQWQEIADANNQRPPMWLRVNRNHHSRDAWL 180

Query: 187 ALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGEL 246
           +LLEQAG+   PH    DA+ L +P  VH LPGF EGWV+VQDA+AQ  +T+L P+ GE 
Sbjct: 181 SLLEQAGMSGFPHEAYPDAVRLASPTPVHALPGFDEGWVTVQDASAQGCITWLEPKNGEQ 240

Query: 247 ILDCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLELTAQVICGDARYPQQ 306
           ILD CAAPGGKT HILE  P++ V+A+D DE RL RV +NL+RL + AQV  GD R P +
Sbjct: 241 ILDLCAAPGGKTTHILEVAPQASVLAVDVDEQRLSRVYDNLKRLGMKAQVKQGDGRKPAE 300

Query: 307 WWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGS 366
           W    QFDRILLDAPCSATGVIRRHPDIKWLRR  DI  LA+LQ +ILDA+W  LK GG+
Sbjct: 301 WCGETQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIKELAQLQSDILDAIWPHLKSGGT 360

Query: 367 LVYATCSITPQENRLQVKAFLERTPDARLVGS-EPAQPGRQILPGEEAMDGFYYAVLSKQ 425
           LVYATCS+ P+EN  Q+ AFL+RTPDA L  +  P  PG Q LPG E  DGF+YA L K+
Sbjct: 361 LVYATCSVLPEENSQQIAAFLKRTPDAALRDTGTPESPGLQNLPGAEEGDGFFYAKLIKE 420