Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Dickeya dianthicola ME23

 Score =  506 bits (1302), Expect = e-148
 Identities = 259/424 (61%), Positives = 311/424 (73%), Gaps = 2/424 (0%)

Query: 2   NVRAAAASALYQVVDLGHSLSNALPAAQQQIRPRDHALLQEICYGVLRQLPRLESISQAL 61
           N+R+ AA+AL QVV+ G SLS+ LPA Q+ I  +D  LLQEIC+GVLR LP+L+   + L
Sbjct: 6   NLRSIAATALVQVVEQGQSLSHLLPALQRDISEKDRGLLQEICFGVLRVLPQLDWYLRQL 65

Query: 62  MGKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNY 121
           M KPL GKQ+V H+L++VGLYQL   RIP HAA+ ETV GA  LK P+L+GLIN VLR +
Sbjct: 66  MAKPLTGKQKVLHYLLMVGLYQLVHTRIPPHAALAETVNGAVALKRPQLKGLINGVLRQF 125

Query: 122 QRDQEGLDAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHHT 181
           QR Q+ L  Q   ++  RY HP WLL+ LK++YP QW+ IVEANN   PMWLRVN QHHT
Sbjct: 126 QRQQDELQ-QRLQNNPARYAHPDWLLQRLKKAYPGQWEHIVEANNQHPPMWLRVNQQHHT 184

Query: 182 RAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAP 241
           R+ Y  LL+   IV  PH+   DA+ LETPC V+QLPGF +GWV+VQDA+AQ  + +L+P
Sbjct: 185 RSAYLTLLQGKEIVAYPHSFYSDAIRLETPCAVNQLPGFEQGWVTVQDASAQGCIHWLSP 244

Query: 242 QAGELILDCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLELTAQVICGDA 301
           Q  E ILD CAAPGGKT HILE  P + V+A+D DE RLKRVRENLQRL   A+V CGD 
Sbjct: 245 QDHEDILDLCAAPGGKTTHILEAAPHAHVLAVDVDEQRLKRVRENLQRLGQHAEVRCGDG 304

Query: 302 RYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQL 361
           R P +W   + FDRILLDAPCSATGVIRRHPDIKWLRR  DIA LA LQ+ IL+A+W +L
Sbjct: 305 RTPTEWCGDKLFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELASLQQAILEAIWPRL 364

Query: 362 KPGGSLVYATCSITPQENRLQVKAFLERTPDARLVGS-EPAQPGRQILPGEEAMDGFYYA 420
           K GG+LVYATCSI P+EN  QV AFL+R PDA LV +  P  PG Q LP  E  DGF+YA
Sbjct: 365 KSGGTLVYATCSILPEENHQQVAAFLQRHPDAALVDTGSPEHPGIQKLPSAEDGDGFFYA 424

Query: 421 VLSK 424
            L K
Sbjct: 425 KLVK 428